Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927939.1_cds_XP_016475625.1_67537
CDS Infomation

[gene=LOC107797265] [db_xref=GeneID:107797265] [protein=scarecrow-like protein 21] [protein_id=XP_016475625.1] [location=65629..67380] [gbkey=CDS]
Sequence

ATGGAATCACACCATCTGTATGGATATGGTGTGACTGGTGCGAATTTGTCATACTCTTAC
TCTAAGGCTGCTACTACTACTCCATTGCCTAATAGGCTGTTGGGAACATTGAAATTTGAA
TCGAGAAATTCTCCAAACTCTCCATTTGCAAACTATTTTGATCCCGATACTCCTACCACA
CTAAGTGATAGCCTGGAGCAGCACAGGTCTACTGAAAATATTTCAGAAACTAGTCCTAGT
AATTCCTCACTGGATTATAATCATTATTTCCATCGCCCTAGCCCCTCTCCAAATTTCCGC
CCAAACACTCTACTGGTTCGCTCTGGTGAAACTTCTTTACTGCAGTATGCAAACCACAGT
CAGAACATGAAAAATGCTCTGCTGCAATTGGAAACTGCTTTAATGGGGCCAGAGGAAGAA
GCCACAACATCCAGTCCCTCGGCAGGTGATATTAAGCAGCCACAAACATCAGGTCAGAGG
TCCAGGATGTGGAATCAAGAAGACCAGATTTCGCGTCGAATTGAAAGACAGCCGTCACAT
GTCTCCACCTTCGGCATATCAAGCAGTGGGATTCACAGTGAGAAGCGGCACAAAGCAACG
GAGGATTTATCATTGTCGGGAATTCCTTCTGGCAACCTAAAGCCACTGCTTATAGCATGT
GCCAGAGCTCTTACCGAGAACAAATTAGATGATTTTGGATCACTGATTGCGAAGGCAAGA
AATGCTATTTCCATTACTGGAGATCCGATTCAACGTCTCGGTGCTTACATAGTAGAAGGG
CTAGTAGCTCGAAAAGAAGCATCCGGAACCAACATTTACAGAGCTCTGAGGTGTAAGGAA
CCAGCTGGCAGGGACTTGCTTTCTTACATGCATATCCTATATGAGATATGTCCTTATCTA
AAGTTTGGTTACATGGCTGCAAATGGTGCAATAGCAGAAGCATGCAGAAATGAAGATCGC
ATTCACATCATAGATTTCCAAATTGCGCAAGGGACTCAGTGGATGACTCTTCTTCAAGCT
CTTGCTGCCAGGCCTAGCGGTGCCCCTCATGTACGTATTACTGGGATTGATGATCCAGTT
TCAAAATATGCCCGGGGAGATGGATTGGCATTTGTGGGGAAGCGGCTCACAGATATTTCT
GAGAAATTCAACATTCCGGTTGAGTTTCATGCAGTGCCAGTTTTCGCTCCTGAAGTCACC
AGGGATATGCTTGACGTTAGGCCTGGCGAGGCTCTGGCAGTAAACTTCCCTTTGGTACTT
CACCACACACCTGATGAGAGTGTTGACGTGACTAACCCAAGGGATGAGCTTCTTAGGATG
GTAAAGTCACTTTCTCCCAAGGTGGTCACTTTGGTGGAACAAGAATCAAATACAAACACA
GCTCCTTTTTTCCCGCGATTTTTAGAAGCTCTAGACTACTATTGTGCCATGTTCGAGTCC
ATAGACGTGACTCTAGAAAGGGACAGGAAGGAGCGGATAAACGTGGAGCAGCATTGTCTG
GCTAGGGATATAGTTAACGTCATAGCATGTGAGGGCAAGGAAAGGGTGGAACGTCATGAG
TTATTAGGCAAATGGAAATTGAGGTTCACAATGGCAGGGTTCAGGCAATATCCTCTGAGC
TCGTACGTGAATTCAGTGATAAAGAGCCTCCTGAGGTGCTACTCAGAGCATTATACACTA
GTGGAGAAAGATGGCGCTATGTTGTTGGGATGGAAGGACAGGAATCTAATCTCAGCATCT
GCTTGGCACTGA

Peptide Sequence

PEP ID

XP_016475625.1
PEP Infomation

PREDICTED: scarecrow-like protein 21 [Nicotiana tabacum]
Sequence

MESHHLYGYGVTGANLSYSYSKAATTTPLPNRLLGTLKFESRNSPNSPFANYFDPDTPTT
LSDSLEQHRSTENISETSPSNSSLDYNHYFHRPSPSPNFRPNTLLVRSGETSLLQYANHS
QNMKNALLQLETALMGPEEEATTSSPSAGDIKQPQTSGQRSRMWNQEDQISRRIERQPSH
VSTFGISSSGIHSEKRHKATEDLSLSGIPSGNLKPLLIACARALTENKLDDFGSLIAKAR
NAISITGDPIQRLGAYIVEGLVARKEASGTNIYRALRCKEPAGRDLLSYMHILYEICPYL
KFGYMAANGAIAEACRNEDRIHIIDFQIAQGTQWMTLLQALAARPSGAPHVRITGIDDPV
SKYARGDGLAFVGKRLTDISEKFNIPVEFHAVPVFAPEVTRDMLDVRPGEALAVNFPLVL
HHTPDESVDVTNPRDELLRMVKSLSPKVVTLVEQESNTNTAPFFPRFLEALDYYCAMFES
IDVTLERDRKERINVEQHCLARDIVNVIACEGKERVERHELLGKWKLRFTMAGFRQYPLS
SYVNSVIKSLLRCYSEHYTLVEKDGAMLLGWKDRNLISASAWH

Transcript Sequence

Gene sequence data has not been registered.